gatb.core-API-1.4.2
SimpleNode< Node > Struct Template Reference

Specific Node structure representing a simple node in the De Bruijn graph. More...

#include <Graph.hpp>

Inheritance diagram for SimpleNode< Node >:
Inheritance graph

Additional Inherited Members

- Public Types inherited from Node_t< Value_t >
typedef Value_t Value
 
- Public Member Functions inherited from Node_t< Value_t >
 Node_t ()
 
 Node_t (const Node_t::Value &kmer, kmer::Strand strand=kmer::STRAND_FORWARD, u_int16_t abundance=0, u_int64_t mphfIndex=0)
 
bool operator== (const Node_t &other) const
 
bool operator!= (const Node_t &other) const
 
bool operator< (const Node_t &other) const
 
void set (const Node_t::Value &kmer, const kmer::Strand &strand)
 
- Public Attributes inherited from Node_t< Value_t >
Node_t::Value kmer
 
kmer::Strand strand
 
u_int16_t abundance
 

Detailed Description

template<typename Node>
struct gatb::core::debruijn::impl::SimpleNode< Node >

Specific Node structure representing a simple node in the De Bruijn graph.

The SimpleNode inherits from the Node structure.

Its semantics is to define nodes this way: indegree==1 && outdegree==1

Its main usage is to be the template specialization type for some Graph class methods.


The documentation for this struct was generated from the following file: